The javascript is generated by Artsiteer and it is part of the Artisteer design, it is not part of mojoPortal. The only thing our exporter plugin does is include it and we do some find and replace logic to rename some variables in that script that would otherwise conflict with the jquery ui slider plugin, ie they have an image slider named slider that conflicts with the slider plugin in jqueryui.
So if there is a bug in the script it is an Artisteer bug not a mojoPortal bug and it isn't something our plugin would ever fix, though it could possibly be fixed by Artisteer in a newer version.
The main job of our plugin is generating the layout.master file of the skin, other than that it just includes a theme.skin file which is the same for all Artisteer skins of a given version and includes the css and js files that Artisteer produces.